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Showing 1 to 28 of 28 multiple databases databases. (View all databases)


BioMart Bio Portal

Provider: BioMart
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Descriptions: The BioMart project provides free software and data services to the international scientific community in order to foster scientific collaboration and facilitate the scientific discovery process. The project adheres to the open source philosophy of promoting collaboration and code reuse. The majority of the contributed databases are of plant or human genomics-oriented data. Under Community, view the linked database list with descriptions and contributor names. Databases originate from the UK, USA, France, Spain, China and other countries. There are three separate portal websites-- the central "Bio" portal, a cancer portal, and one for mouse data.  Unfortunately, no link back to BioMart is provided once the user accesses one of the other portals.
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BLAST (NCBI)

Provider: National Center for Biotechnology Information
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Descriptions: The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.
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Catalog of U.S. Government Publications

Provider: Superintendent of Documents, U.S. Government Printing Office
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Descriptions: The Catalog of U.S. Government Publications (CGP) is the finding tool for electronic and print publications from all three branches of the federal government. It contains descriptive records for historical and current publications, and provides direct links to those available online.   All records generated since July 1976 are included, and the CGP is updated daily. Eventually the catalog will include records for publications dating back to the late 1800s, making it the central point for locating both new and historical Government publications. Until then, for publications issued before 1976, a printed Monthly Catalog of U. S. Government Publications, should be consulted. This publication, CGP's predecessor, is available at any Federal Depository Library. To locate the depository nearest you, use GPO's Locate Libraries service at: http://catalog.gpo.gov/fdlpdir/public.jsp .   The CGP provides Basic, Advanced, and Expert search options. Searches can be narrowed to specific collections or formats, such as maps, Congressional, or Internet publications. Search results or selected records can be e-mailed.
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Complementary and Alternative Therapies (Medline Plus)

Provider: National Institutes of Health/National Library of Medicine
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Descriptions: This section of Medline Plus includes sections on acupuncture, alternative medicine, herbal medicine, cancer alternative therapies, chiropractic, and dietary supplements. These sections include latest news, topic overviews, links to associations and organizations, interactive tutorials, and clinical trials. A Spanish language version is also available.
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Directory of Health Organizations (DIRLINE)

Provider: U.S. Dept. of Health and Human Services/National Library of Medicine
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Descriptions: A useful directory of government and private organizations, from the federal to the local level, that support research on and/or provide assistance to individuals and special populations; also includes links to disaster resources. Search by keyword or organization name, with the ability to limit to ZIP code, or by states, for disaster organiNzations.
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Drug Information Portal

Provider: National Library of Medicine
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Descriptions: This site provides the public, healthcare professionals and researchers with a convenient gateway to current and accurate drug information from the National Library of Medicine, as well as links to drug information from the FDA and CDC, PubMed and MedlinePlus.
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Effective Health Care Program – AHRQ

Provider: Agency for Healthcare Research and Quality (AHRQ)
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Descriptions: First funded by Congress in 2005, the Effective Health Care Program funds and synthesizes the findings of teams of researchers and clinicians across North America, to identify ways to improve the quality of health care through evidence-based decision-making. Research summaries are available for consumers (many with Spanish translations), clinicians and policy-makers. Also for patients, short videos on treatment options, helpful comparative charts on the effectiveness of different treatments for various conditions. Many resources in various formats are provided. The Program invites comments and topic research/review suggestions, and data deposit by medical professionals. Links are provided to plug-ins for viewing video content.
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FDA Drugs: Information for Healthcare Professionals

Provider: U.S. Food and Drug Administration
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Descriptions: Use the prominent links to navigate to various sections of FDA Drugs: Drug Recalls, Drug Shortages, Drug Safety Communications, Medication Errors, and more. Drug Info Rounds contains instructive videos for practicing pharmacists. MedWatch is the safety and adverse event reporting mechanism, and one can sign up for email or RSS feed of MedWatch updates.  This site is somewhat complex, linking to a wealth of information and many different sections within FDA Drugs, but is easy to navigate via the "breadcrumbs" posted at the top, showing the user the path already taken. Tabs along the top lead to sections devoted to other areas of regulation under the FDA's purview, such as cosmetics, food, radiation-emitting products and medical devices.
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FDA Maude Database

Provider: U.S. Food and Drug Administration
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Descriptions: MAUDE stands for Manufacturer And User Device Experience. Each year, the FDA receives several hundred thousand medical device reports (MDRs) of suspected device-associated deaths, serious injuries and malfunctions. The FDA uses MDRs to monitor device performance, detect potential device-related safety issues, and contribute to benefit-risk assessments of these products. The MAUDE database houses MDRs submitted to the FDA by mandatory reporters 1 (manufacturers, importers and device user facilities) and voluntary reporters such as health care professionals, patients and consumers. Some information dates back as far as 1991. Updates are posted weekly. Zip file format of Maude data is available for downloading.
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Frontiers

Provider: Frontiers
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Descriptions: Frontiers was launched in 2007 by scientists from the Swiss Federal Institute of  Technology in a grassroots initiative.  Frontiers is an open-access, scholarly, primarily scientific publisher, producing 26 community-driven journals with growing impact factors, and with more than 25,000 high-impact researchers on its editorial boards. Frontiers is notable for a democratic system of peer review, the details of which can be examined under the "About" section. Authors with accepted articles who demonstrably cannot bear the cost of publication can apply to the Frontiers Research Foundation for a grant to waive some or all author fees. Waivers are dependent on the World Bank economic status of the author's country. Many video lectures are posted in a keyword-searchable, subject-browse interface. Read abstracts of about 180 downloadable e-books, which can be purchased for a negligible fee. The Frontiers Community part of the site is home to an image bank, an international conference/events schedule, a blogging platform with numerous active blogs, and a jobs board. Authors, editors and reviewers come from prestigious institutions worldwide, many of them from the Texas Medical Center. To participate in the networking components, Frontiers Research Network and Frontiers Community, complete the free online registration form. Maintain contact and receive alerts via almost any social networking tool or via RSS feed. Many TMC researchers participate.
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GQuery: Global Cross-database NCBI Search

Provider: National Center for Bioinformatics Information (NCBI)
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Descriptions: Integrated, text-based search and retrieval system used at the National Center for Biotechnology Information for its major databases: PubMed, Nucleotide and Protein Sequences, Protein Structures, Complete Genomes, Taxonomy, and others. GQuery integrates the scientific literature, DNA and protein sequence databases, 3D protein structure and protein domain data, population study datasets, expression data, assemblies of complete genomes, and taxonomic information into a tightly interlinked system.
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HealthCare.gov

Provider: U.S. Department of Health and Human Services (DHHS)
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Descriptions: This is the U.S. government location that helps you put the Affordable Care Act into practice. Here you can shop the health insurance marketplace, find the plan that best fits your situation, and enroll for coverage. Information provided is available in English and Spanish, with some resources available in Chinese, Korean, Portuguese, Vietnamese, Creole and Polish. Find plans for individuals and families, and plans for small businesses. Read about your rights and protections. Fill out information that the site will use to guide you toward the benefits you're qualified for. Get your questions answered using the Search box. Open enrollment will begin annually in October. In the first enrollment period that started Oct. 1, 2013, the open enrollment period does not end until March 31, 2014.
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HeritageQuest Online

Provider: ProQuest
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Descriptions: This database contains thousands of digitized books, the available digitized US Federal Census record from 1790-1940, PERSI (Periodical Source Index Archive), Freedman's Bank Records, Revolutionary War Pension Records, and other expanding collections invaluable to genealogists.
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KEGG (Kyoto Encyclopedia of Genes and Genomics)

Provider: Kanehisa Laboratories, Japan
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Descriptions: KEGG is a resource purposed to facilitate understanding of the functions and utilities of the biological system--  cells, organisms and ultimately the ecosystem--  based on genomic and molecular-level information. It is a computer representation of the biological system, consisting of the molecular building blocks-- genes, proteins and chemical substances, integrated with molecular wiring diagrams of interaction, reaction and relational networks. Extensive data is available to view; ftp downloading requires a subscription. KEGG was developed in collaboration with the Bioinformatics Center, Institute for Chemical Research, Kyoto University and the Human Genome Center, Institute of Medical Science, University of Tokyo.
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LearningExpress Library (TexShare)

Provider: LearningExpress LLC
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Descriptions: LearningExpress Library is a suite of diverse resources for catching up on skills, exploring career options, or preparing for high school equivalency and college entrance exams. Sections that might be of interest include the Computer Skills Center where there are tutorials on various Microsoft Office programs, and the Adult Learning Center, which contains tutorials that aid in preparing one for US citizenship (Spanish version available) and aids to better writing and reading skills that may be of help to non-native speakers learning English. Free individual registration is required to access the course material.
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Literature Resource Center

Provider: Gale
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Descriptions: A literature reference database suite designed for all levels of researchers, Literature Resource Center provides biographical, bibliographical and critical content. Full-text articles from scholarly journals and literary magazines are combined with critical essays, work and topic overviews, full-text works, biographies, and more to provide a wealth of information on authors, their works, and literary movements.
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National Library of Medicine: Databases, Resources and APIs

Provider: National Library of Medicine
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Descriptions: This is NLM's portal to its approximately 300 research resources, from genetics to the history of medicine, from datasets to mobile apps.  Browse the list with all descriptive information, or search by subject term, type of data or tool, or by terms related to the content or intended audience.
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NCBI (National Center for Biotechnology Information)

Provider: National Center for Biotechnology Information/National Library of Medicine
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Descriptions: The National Center for Biotechnology Information advances science and health by providing access to biomedical and genomic information. NCBI provides a large number of resources for scientific research, including software and many databases.
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Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC)

Provider: NITRC,
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Descriptions: Originally funded by the NIH Blueprint for Neuroscience Research, NITRC facilitates finding and comparing neuroimaging resources for functional and structural neuroimaging analyses—tools that were once hidden in a researcher's laboratory and well-known resources. NITRC collects and points to standardized information about tools, making the task of finding and comparing them easier. This site can help researchers find the right functional or structural neuroimaging tool or resource and serve as an aid in deciding whether it will be helpful to them. 
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NICE Pathways

Provider: National Institute for Health and Care Excellence (UK)
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Descriptions: This online tool from the UK's National Institute for Health and Care Excellence gives fast, easy access by topic to the full range of guidance from NICE, including quality standards, technology appraisals, clinical and public health guidance and implementation tools.
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NLM Gallery of Mobile App’s and Sites

Provider: National Library of Medicine
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Descriptions: This is the hub for launching or installing the mobile websites and applications of about twenty National Library of Medicine databases, including ToxNet, Drug Information Portal, PubMed, DailyMed, MedlinePlus, and Radiation Emergency Medical Management (REMM).
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Protein Data Bank: An Information Portal to Biological Macromolecular Structures

Provider: RCSB (Research Collaboratory for Structural Bioinformatics)
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Descriptions:  "The RCSB (Research Collaboratory for Structural Bioinformatics) is dedicated to improving our understanding of the function of biological systems through the study of the 3-D structure of biological macromolecules. RCSB members work cooperatively and equally through joint grants and subsequently provide free public resources and publications to assist others and further the fields of bioinformatics and biology."  Protein Data Bank (PDB) curates and annotates data according to agreed-upon standards and is a member of the ww (world wide) PDB. Use this database to perform simple and advanced searches based on sequence, structure and function annotations, and to visualize, download, and analyze molecules. The database is primarily for researchers, but the site also includes an entire section (PDB101) of information quite accessible enough for educational purposes. Check out the "Molecule of the Month" feature. The extensive archive contains information about experimentally-determined structures of proteins, nucleic acids, and complex assemblies.  As with many scientific databases, a personal log-in affords access to more features. The database is managed by Rutgers and University of California San Diego.
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PubChem

Provider: National Center for Biotechnology Information/National Library of Medicine
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Descriptions: PubChem provides information on the biological activities of small molecules and is a component of NIH's Molecular Libraries Roadmap Initiative. It includes substance information, compound structures, and bioactivity data in three primary databases: PCSubstance, PCCompound and PCBioAssay. PCSubstance contains more than 12 million records; PCCompound contains more than 7 million unique structures; and PCBioAssay contains more than 200 bioassays.
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PubMed Health

Provider: National Library of Medicine/National Center for Biotechnology Information
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Descriptions: PubMed Health, covering 2003 to the present, provides summaries and full texts of selected systematic reviews in one place. There is also information for consumers and clinicians based on those reviews. A search on PubMed Health runs simultaneously in PubMed. A filter is used to identify all the indexed scientific articles at the NLM that might be systematic reviews. This search includes articles from before 2003. Information partners selected by PubMed Health to contribute clinical effectiveness information are:

  • Agency for Health Care Research and Quality (AHRQ)
  • Centre for Reviews and Dissemination (CRD)
  • The Cochrane Collaboration (CC)
  • German Institute for Quality and Efficiency in Health Care (IQWiG)
  • National Cancer Institute (NCI)
  • National Institute for Health and Care Excellence guidelines program (NICE)
  • National Institute for Health Research (NIHR) Health Technology Assessment Programme (NIHR HTA)
  • Oregon Health and Science University's Drug Effectiveness Review Project (DERP)
  • Department of Veterans Affairs' Evidence-based Synthesis Program from the Veterans Health Administration R&D (VA ESP)
England's Behind the Headlines service is from the National Health Service (NHS Choices). Also contains information from the A.D.A.M. Illustrated Medical Encyclopedia and Micromedex Consumer Medication Information.
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Tests in Print

Provider: EBSCO
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Descriptions: Produced by the Buros Institute of Mental Measurements at the University of Nebraska, Tests in Print (TIP) serves as a comprehensive bibliography to all known  English-language, commercially available . TIP provides vital information to users including test purpose, test publisher, in-print status, price, test acronym, intended test population, administration times, publication date(s), and test author(s). Mobile access to Tests in Print is available here. This database is combined with Mental Measurements Yearbook. The two are searched on their own via this link, and are also set to be searched by default in tandem with the CINAHL database.
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TOXNET

Provider: National Library of Medicine
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Descriptions: TOXNET is a cross-searchable cluster of databases covering toxicology, hazardous chemicals, environmental health, toxic releases and related areas. Search all databases from the center search box, or choose a database to search. This portal is managed by the Toxicology and Environmental Health Information Program, Division of Specialized Information Services, National Library of Medicine. Databases include, but are not limited to:

  • ChemIDplus (database of 370,000 chemicals with synonyms and structure data)
  • HSDB (Hazardous Substances Data Bank)
  • TOXLINE (Toxicology Literature Online)
  • CCRIS (Chemical Carcinogenesis Research Information System)
  • DART (Developmental and Reproductive Toxicology Database)
  • GENETOX (Genetic Toxicology Data Bank) and CPDB (comparative toxogenomics)
  • IRIS (Integrated Risk Information System- dose-response assessment)
  • ITER (International Toxicity Estimates for Risk)
  • LactMed (drugs and lactation information)
  • TRI (Toxics Release Inventory)
  • Haz-Map (occupational health)
  • Household Products (potential effects of chemicals in common household products)
  • TOXMAP (Geographic form of the TRI database)

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Twentieth-Century Poetry, American and English (TexShare)

Provider: ProQuest
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Descriptions: Two full-text collections consisting of thousands of works by almost 600 twentieth-century British and American poets, formatted and arranged according to the volumes in which they were published. The other resources in the larger collection, Chadwyck-Healey Literature Collections, are also accessible.
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UniProt

Provider: UniProt Consortium
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Descriptions: "The mission of UniProt is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequence and functional information."  Available material consists of: UniProtKB, a two-section protein knowledge-base consisting of SwissProt and TrEMBL; UniRef (sequence clusters;) UniParc (a sequence archive for tracking sequences and identifiers) and the supporting data (literature citations, taxonomy, keywords, nomenclature, guidelines and indexes.) A user manual and primer on annotation are provided as well. UniProt is distributed free under a Creative Commons attribution license. Updates are frequent and updated releases must be downloaded from the website. Much of UniProt's funding is provided by the NIH.
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