Date: Tuesday, June 19, 2018
Time: 6:30pm – 7:30pm
Presenter: Emmanuel Onwuachi
Location: Street Level Classroom
Using PubMed tags(filters) to search for relevant articles.
Provider: SNOMED International
Descriptions: SNOMED International is a not-for-profit association that develops and promotes use of SNOMED CT to support safe and effective health information exchange. SNOMED CT is a clinical terminology and is considered to be the most comprehensive multilingual healthcare terminology in the world... Each year, avoidable deaths and injuries occur because of poor communication between healthcare practitioners. The delivery of a standard clinical language for use across the world's health information systems can therefore be a significant step towards improving the quality and safety of healthcare.
Keywords: electronic health record, informatics, information management, international, multilingual, ontology, quality, software, standard of care, terminology
Provider: Whole Brain project - UC-San Diego
Descriptions: The Whole Brain Catalog is the flagship project of the Whole Brain Project at the University of California - San Diego. It is an open source, downloadable, multi-scale virtual catalog of the mouse brain and its cellular components, providing zoomable 3D views of structures and their surroundings deep inside the mouse brain. The data is also brought to life with simulation and animation. "In providing open source and collaborative tools, the Whole Brain Project allows neuroscience researchers to make new connections with collaborators and newly discovered data. Combining previously unconnected databases across a single network make possible new and exciting insights about the brain."
Keywords: animal, animation, biomedical research, brain, life sciences, mouse, neurology, neuroscience, open access, open source, research, software
Provider: National Center for Microscopy and Imaging Research/University of California San Diego
Contents: images, links, open-source, protocols, video, websites
Access Level: Free, Open Access
Descriptions: NCMIR develops technologies to facilitate understanding of biological systems from the gross anatomical to the molecular scale and makes those technologies available to biomedical researchers. NCMIR provides expertise, infrastructure, technological development, and an environment in which new information about the 3D ultrastructure of tissues, cells, and macromolecular complexes can be easily obtained and analyzed.
Keywords: biomedical research, cell biology, data analysis, laboratory, life sciences, medical imaging, research tools, software
Provider: Brigham & Women's Hospital, Boston, MA
Descriptions: From the website: "The main research of the SPL is to develop post-processing methods for digital medical imaging data and to use these methods for answering real-life questions." Contains an image gallery, full-text access to publications, downloadable tutorials and software. Brigham & Women's Hospital is a teaching affiliate of Harvard Medical School.
Keywords: human anatomy, measurement, medical devices, medical imaging, neurology, radiology, software, surgery, tutorial
Provider: Sigma Theta Tau
Descriptions: Nursing Knowledge International is a not-for-profit subsidiary of the Honor Society of Nursing, Sigma Theta Tau International. Its mission is "to help nurses help others... by providing products and services that serve the global community of nurses in its pursuit of health care knowledge, career advancement, research and continued development of the nursing profession." The website is a portal to resources, free and fee, including books, journals, individual articles, CD-ROM and video instruction, and news items. Free registration gives access to more resources, and allows the user to create a personal profile.
Keywords: continuing education, full text, nursing, software, workforce
Provider: National Institutes of Health
Descriptions: The Neuroscience Information Framework (NIF) is a semantically-enhanced portal to a dynamic inventory of Web-based neuroscience resources. An initiative of the NIH Blueprint for Neuroscience Research, NIF enhances discovery and access to often unindexed but publicly available research data, datasets, software and tools in the deep web, as well as linking to PubMed records and open-access literature. The NIF Project provides the NIF Registry, Antibody Registry, Drug Related Gene Database, neuroscience ontology and a way to contribute to it (via the NeuroLex wiki) and semantic tagging services. NIF Navigator, a customizable, stand-alone search tool for incorporation into websites or wikis, draws query results from all the NIF's own components and from other sites and accessible databases. The valuable resources at NIF are too numerous to be described adequately here.
Keywords: biomedical research, clinical trials, data, data-sharing, datasets, disease, drugs, federal agencies, full text, genes, genomics, grants, images, informatics, links, networking, neuroscience, NIH, portal, research, scientist, social networking, software
Provider: Netherlands BioInformatics Centre
Descriptions: NBIC is engaged in bioinformatics research and education. Its website includes free software downloads, information on databases and projects, a journal and newsletter, and secondary-level education materials.
Keywords: biomedical research, blog, conference, data analysis, DNA, genes, genome, genomics, informatics, journal, news, open source, partial open access, pharmacogenomics, research, scientist, sequencing, software
Provider: NOAA (National Oceanic and Atmospheric Administration)
Descriptions: The National Hurricane Center website provides interactive satellite and radar maps, frequently-updated land and marine advisories, and (in the presence of active storm systems)updated forecasts based on its aerial reconnaissance findings. Three- and 5-day outlooks, likely landfall ranges ("cones"), wind speed prediction maps and storm surge projections are featured. Many links to other authoritative and relevant emergency planning resources are provided from this site. There is a downloadable blank hurricane tracking map available, and RSS feed is provided.
Keywords: disaster, emergency preparedness, federal agencies, hurricane, images, maps, news, reports, RSS feed, software, weather
Descriptions: Jing is free software for capturing and annotating screen shots or creating screencasts, and the results can be integrated with documents, saved and shared. This easy-to-use application lends itself to collaboration projects and to creating tutorials or illustrating technical bugs in action. A Pro version is also available at a very low cost. Jing is available for Windows XP, Vista and Windows 7, or Mac OS X.
Keywords: free, mashups, software, video, Web tools